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Command Line Interface
Click Based CLI
API Reference
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Symbols
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A
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B
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C
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D
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E
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F
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H
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I
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K
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L
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M
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N
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O
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P
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Q
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R
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S
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T
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U
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W
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X
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Y
Symbols
--and-submit
tdub-apply-all command line option
tdub-train-scan command line option
--bkg-sample-frac <bkg_sample_frac>
tdub-train-prep command line option
--chisq
tdub-rex-stacks command line option
--early-stop <early_stop>
tdub-train-scan command line option
tdub-train-single command line option
--fold-results <fold_results>
tdub-apply-all command line option
tdub-apply-single command line option
--ignore-list <ignore_list>
tdub-train-prep command line option
--learning-rate <learning_rate>
tdub-train-single command line option
--max-depth <max_depth>
tdub-train-single command line option
--min-child-samples <min_child_samples>
tdub-train-single command line option
--multiple-ttbar-samples
tdub-train-prep command line option
--n-res <n_res>
tdub-train-check command line option
--n-splits <n_splits>
tdub-train-fold command line option
--n-test <n_test>
tdub-rex-stacks command line option
--nlo-method <nlo_method>
tdub-train-prep command line option
--no-chisq
tdub-rex-stacks command line option
--num-leaves <num_leaves>
tdub-train-single command line option
--outdir <outdir>
tdub-misc-drdscomps command line option
tdub-rex-impstabs command line option
tdub-rex-stabs command line option
tdub-train-shapes command line option
--override-selection <override_selection>
tdub-train-prep command line option
--overwrite
tdub-train-scan command line option
--pre-exec <pre_exec>
tdub-train-prep command line option
tdub-train-scan command line option
tdub-train-single command line option
--print-top
tdub-train-check command line option
--reg-lambda <reg_lambda>
tdub-train-single command line option
--single-results <single_results>
tdub-apply-all command line option
tdub-apply-single command line option
--test-size <test_size>
tdub-train-scan command line option
tdub-train-single command line option
--tests <tests>
tdub-rex-stabs command line option
--thesis
tdub-misc-drdscomps command line option
tdub-rex-impact command line option
tdub-rex-stacks command line option
--use-dilep
tdub-train-prep command line option
--use-inc-af2
tdub-train-prep command line option
--use-sklearn
tdub-train-single command line option
--use-tptrw
tdub-misc-soverb command line option
tdub-train-fold command line option
tdub-train-prep command line option
--use-trrw
tdub-train-prep command line option
--use-xgboost
tdub-train-single command line option
-a
tdub-train-prep command line option
-d
tdub-train-prep command line option
tdub-train-single command line option
-e
tdub-train-scan command line option
tdub-train-single command line option
-f
tdub-apply-all command line option
tdub-apply-single command line option
tdub-train-prep command line option
-g
tdub-train-single command line option
-i
tdub-train-prep command line option
-k
tdub-train-single command line option
-l
tdub-train-single command line option
-m
tdub-train-prep command line option
tdub-train-single command line option
-n
tdub-rex-stacks command line option
tdub-train-check command line option
tdub-train-fold command line option
tdub-train-prep command line option
tdub-train-single command line option
-o
tdub-misc-drdscomps command line option
tdub-rex-impstabs command line option
tdub-rex-stabs command line option
tdub-train-shapes command line option
-p
tdub-train-check command line option
tdub-train-prep command line option
tdub-train-scan command line option
tdub-train-single command line option
-r
tdub-train-prep command line option
tdub-train-single command line option
-s
tdub-apply-all command line option
tdub-apply-single command line option
tdub-train-scan command line option
tdub-train-single command line option
-t
tdub-misc-soverb command line option
tdub-rex-stabs command line option
tdub-train-fold command line option
tdub-train-prep command line option
-x
tdub-train-prep command line option
A
add_condor_arguments() (in module tdub.batch)
apply_to_dataframe() (tdub.ml_apply.BaseTrainSummary method)
(tdub.ml_apply.FoldedTrainSummary method)
(tdub.ml_apply.SingleTrainSummary method)
apply_weight() (in module tdub.frames)
apply_weight_campaign() (in module tdub.frames)
apply_weight_tptrw() (in module tdub.frames)
apply_weight_trrw() (in module tdub.frames)
ARRNAME
tdub-apply-all command line option
tdub-apply-single command line option
as_region() (in module tdub.data)
auc (tdub.ml_train.SingleTrainingSummary attribute)
available_regions() (in module tdub.rex)
AVOID_IN_CLF (in module tdub.config)
AVOID_IN_CLF_1j1b (in module tdub.config)
AVOID_IN_CLF_2j1b (in module tdub.config)
AVOID_IN_CLF_2j2b (in module tdub.config)
avoids_for() (in module tdub.data)
B
BaseTrainSummary (class in tdub.ml_apply)
bin_centers() (in module tdub.hist)
bin_width() (tdub.root.TH1 property)
branches_from() (in module tdub.data)
build_array() (in module tdub.ml_apply)
C
campaign (tdub.data.SampleInfo attribute)
candidates (tdub.features.FeatureSelector attribute)
canvas_from_counts() (in module tdub.art)
categorize_branches() (in module tdub.data)
centers() (tdub.root.TH1 property)
central (tdub.rex.FitParam attribute)
check_candidates() (tdub.features.FeatureSelector method)
check_collinearity() (tdub.features.FeatureSelector method)
check_for_uniques() (tdub.features.FeatureSelector method)
check_importances() (tdub.features.FeatureSelector method)
check_iterative_add_aucs() (tdub.features.FeatureSelector method)
check_iterative_remove_aucs() (tdub.features.FeatureSelector method)
chisq() (in module tdub.rex)
chisq_text() (in module tdub.rex)
chisquared_cdf_c() (in module tdub.math)
chisquared_test() (in module tdub.math)
compare_nuispar() (in module tdub.rex)
compare_uncertainty() (in module tdub.rex)
comparison_summary() (in module tdub.rex)
condor_preamble() (in module tdub.batch)
corr_matrix (tdub.features.FeatureSelector attribute)
corr_threshold (tdub.features.FeatureSelector attribute)
correlated (tdub.features.FeatureSelector attribute)
counts() (tdub.root.TH1 property)
create_condor_workspace() (in module tdub.batch)
create_parquet_files() (in module tdub.features)
D
data (tdub.features.FeatureSelector attribute)
data_histogram() (in module tdub.rex)
DATADIR
tdub-apply-all command line option
tdub-misc-drdscomps command line option
tdub-misc-soverb command line option
tdub-train-fold command line option
tdub-train-prep command line option
tdub-train-scan command line option
tdub-train-shapes command line option
tdub-train-single command line option
default_clf_opts (tdub.features.FeatureSelector attribute)
delta_param() (in module tdub.rex)
delta_poi() (in module tdub.rex)
down (tdub.hist.SystematicComparison attribute)
draw() (tdub.ml_train.ResponseHistograms method)
draw_atlas_label() (in module tdub.art)
draw_impact_barh() (in module tdub.art)
draw_uncertainty_bands() (in module tdub.art)
drop_avoid() (in module tdub.frames)
drop_cols() (in module tdub.frames)
drop_jet2() (in module tdub.frames)
dsid (tdub.data.SampleInfo attribute)
E
edges() (tdub.root.TH1 property)
edges_and_centers() (in module tdub.hist)
errors() (tdub.root.TH1 property)
F
features() (tdub.ml_apply.BaseTrainSummary property)
features_for() (in module tdub.data)
FeatureSelector (class in tdub.features)
FEATURESET_1j1b (in module tdub.config)
FEATURESET_2j1b (in module tdub.config)
FEATURESET_2j2b (in module tdub.config)
fit_parameter() (in module tdub.rex)
FitParam (class in tdub.rex)
folded_training() (in module tdub.ml_train)
FoldedTrainSummary (class in tdub.ml_apply)
folder() (tdub.ml_apply.FoldedTrainSummary property)
from_str() (tdub.data.Region static method)
H
HERWIG704
tdub-rex-impstabs command line option
HERWIG713
tdub-rex-impstabs command line option
I
importances (tdub.features.FeatureSelector attribute)
INFILE
tdub-apply-single command line option
init_meta_logy() (in module tdub.config)
init_meta_table() (in module tdub.config)
iterative_add_aucs (tdub.features.FeatureSelector attribute)
iterative_remove_aucs (tdub.features.FeatureSelector attribute)
iterative_selection() (in module tdub.frames)
K
kolmogorov_prob() (in module tdub.math)
ks_bkg_pval() (tdub.ml_train.ResponseHistograms property)
ks_bkg_test() (tdub.ml_train.ResponseHistograms property)
ks_pvalue_bkg (tdub.ml_train.SingleTrainingSummary attribute)
ks_pvalue_sig (tdub.ml_train.SingleTrainingSummary attribute)
ks_sig_pval() (tdub.ml_train.ResponseHistograms property)
ks_sig_test() (tdub.ml_train.ResponseHistograms property)
ks_test_bkg (tdub.ml_train.SingleTrainingSummary attribute)
ks_test_sig (tdub.ml_train.SingleTrainingSummary attribute)
ks_twosample_binned() (in module tdub.math)
L
label (tdub.rex.FitParam attribute)
labels (tdub.features.FeatureSelector attribute)
legend_last_to_first() (in module tdub.art)
lgbm_gen_classifier() (in module tdub.ml_train)
lgbm_train_classifier() (in module tdub.ml_train)
M
meta_axis_label() (in module tdub.rex)
meta_text() (in module tdub.rex)
model() (tdub.ml_apply.SingleTrainSummary property)
model0() (tdub.ml_apply.FoldedTrainSummary property)
model1() (tdub.ml_apply.FoldedTrainSummary property)
model2() (tdub.ml_apply.FoldedTrainSummary property)
module
tdub.config
N
name (tdub.features.FeatureSelector attribute)
(tdub.rex.FitParam attribute)
nominal (tdub.hist.SystematicComparison attribute)
nuispar_impact() (in module tdub.rex)
nuispar_impact_plot_df() (in module tdub.rex)
nuispar_impact_plot_top20() (in module tdub.rex)
nuispar_impacts() (in module tdub.rex)
O
one_sided() (tdub.hist.SystematicComparison static method)
one_sided_comparison_plot() (in module tdub.art)
OUTDIR
tdub-apply-all command line option
tdub-apply-single command line option
tdub-train-prep command line option
tdub-train-single command line option
P
parse_summary_json() (tdub.ml_apply.BaseTrainSummary method)
(tdub.ml_apply.FoldedTrainSummary method)
percent_diff_down (tdub.hist.SystematicComparison attribute)
percent_diff_max() (tdub.hist.SystematicComparison property)
percent_diff_min() (tdub.hist.SystematicComparison property)
percent_diff_up (tdub.hist.SystematicComparison attribute)
persist_prepared_data() (in module tdub.ml_train)
phy_process (tdub.data.SampleInfo attribute)
plot_all_regions() (in module tdub.rex)
plot_region_stage_ff() (in module tdub.rex)
PLOTTING_LOGY (in module tdub.config)
PLOTTING_META_TABLE (in module tdub.config)
post_down (tdub.rex.FitParam attribute)
post_up (tdub.rex.FitParam attribute)
postfit_available() (in module tdub.rex)
postfit_histogram() (in module tdub.rex)
postfit_histograms() (in module tdub.rex)
postfit_total_and_uncertainty() (in module tdub.rex)
pre_down (tdub.rex.FitParam attribute)
pre_up (tdub.rex.FitParam attribute)
prefit_histogram() (in module tdub.rex)
prefit_histograms() (in module tdub.rex)
prefit_total_and_uncertainty() (in module tdub.rex)
prepare_from_parquet() (in module tdub.features)
prepare_from_root() (in module tdub.ml_train)
prettify_label() (in module tdub.rex)
Q
quick_files() (in module tdub.data)
R
r1j1b (tdub.data.Region attribute)
r2j1b (tdub.data.Region attribute)
r2j2b (tdub.data.Region attribute)
RANDOM_STATE (in module tdub.config)
raw_dataframe() (in module tdub.frames)
raw_features (tdub.features.FeatureSelector attribute)
REGION
tdub-train-prep command line option
Region (class in tdub.data)
region() (tdub.ml_apply.BaseTrainSummary property)
ResponseHistograms (class in tdub.ml_train)
REX_DIR
tdub-rex-impact command line option
tdub-rex-stacks command line option
S
SampleInfo (class in tdub.data)
satisfying_selection() (in module tdub.frames)
save_result() (tdub.features.FeatureSelector method)
SCANDIR
tdub-train-fold command line option
SELECTION_1j1b (in module tdub.config)
SELECTION_2j1b (in module tdub.config)
SELECTION_2j2b (in module tdub.config)
selection_as_numexpr() (in module tdub.data)
selection_as_root() (in module tdub.data)
selection_branches() (in module tdub.data)
selection_for() (in module tdub.data)
selection_used() (tdub.ml_apply.BaseTrainSummary property)
SELECTIONS
tdub-misc-soverb command line option
setup_tdub_style() (in module tdub.art)
sig_hi (tdub.rex.FitParam attribute)
sig_lo (tdub.rex.FitParam attribute)
sim_type (tdub.data.SampleInfo attribute)
single_training() (in module tdub.ml_train)
SingleTrainingSummary (class in tdub.ml_train)
SingleTrainSummary (class in tdub.ml_apply)
sklearn_gen_classifier() (in module tdub.ml_train)
sklearn_train_classifier() (in module tdub.ml_train)
stability_test_parton_shower_impacts() (in module tdub.rex)
stability_test_standard() (in module tdub.rex)
stack_canvas() (in module tdub.rex)
summary() (tdub.ml_apply.BaseTrainSummary property)
SUMMARY_FILE
tdub-train-itables command line option
SystematicComparison (class in tdub.hist)
T
tdub-apply-all command line option
--and-submit
--fold-results <fold_results>
--single-results <single_results>
-f
-s
ARRNAME
DATADIR
OUTDIR
WORKSPACE
tdub-apply-single command line option
--fold-results <fold_results>
--single-results <single_results>
-f
-s
ARRNAME
INFILE
OUTDIR
tdub-misc-drdscomps command line option
--outdir <outdir>
--thesis
-o
DATADIR
tdub-misc-soverb command line option
--use-tptrw
-t
DATADIR
SELECTIONS
tdub-rex-impact command line option
--thesis
REX_DIR
tdub-rex-impstabs command line option
--outdir <outdir>
-o
HERWIG704
HERWIG713
tdub-rex-stabs command line option
--outdir <outdir>
--tests <tests>
-o
-t
UMBRELLA
tdub-rex-stacks command line option
--chisq
--n-test <n_test>
--no-chisq
--thesis
-n
REX_DIR
tdub-train-check command line option
--n-res <n_res>
--print-top
-n
-p
WORKSPACE
tdub-train-fold command line option
--n-splits <n_splits>
--use-tptrw
-n
-t
DATADIR
SCANDIR
tdub-train-itables command line option
SUMMARY_FILE
tdub-train-prep command line option
--bkg-sample-frac <bkg_sample_frac>
--ignore-list <ignore_list>
--multiple-ttbar-samples
--nlo-method <nlo_method>
--override-selection <override_selection>
--pre-exec <pre_exec>
--use-dilep
--use-inc-af2
--use-tptrw
--use-trrw
-a
-d
-f
-i
-m
-n
-p
-r
-t
-x
DATADIR
OUTDIR
REGION
tdub-train-scan command line option
--and-submit
--early-stop <early_stop>
--overwrite
--pre-exec <pre_exec>
--test-size <test_size>
-e
-p
-s
DATADIR
WORKSPACE
tdub-train-shapes command line option
--outdir <outdir>
-o
DATADIR
tdub-train-single command line option
--early-stop <early_stop>
--learning-rate <learning_rate>
--max-depth <max_depth>
--min-child-samples <min_child_samples>
--num-leaves <num_leaves>
--pre-exec <pre_exec>
--reg-lambda <reg_lambda>
--test-size <test_size>
--use-sklearn
--use-xgboost
-d
-e
-g
-k
-l
-m
-n
-p
-r
-s
DATADIR
OUTDIR
tdub.config
module
tdub_train_axes() (in module tdub.ml_train)
template_max() (tdub.hist.SystematicComparison property)
TGraphAsymmErrors (class in tdub.root)
TH1 (class in tdub.root)
to_uniform_bins() (in module tdub.hist)
tree (tdub.data.SampleInfo attribute)
U
UMBRELLA
tdub-rex-stabs command line option
up (tdub.hist.SystematicComparison attribute)
W
weights (tdub.features.FeatureSelector attribute)
WORKSPACE
tdub-apply-all command line option
tdub-train-check command line option
tdub-train-scan command line option
X
xhi() (tdub.root.TGraphAsymmErrors property)
xlo() (tdub.root.TGraphAsymmErrors property)
Y
yhi() (tdub.root.TGraphAsymmErrors property)
ylo() (tdub.root.TGraphAsymmErrors property)
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